📄 Computational drug discovery and repurposing for the treatment of COVID-19: A systematic review
📘Journal: Bioorganic Chemistry (I.F.=5.307)
🗓Publish year: 2021
📎 Study the paper
📲Channel: @Bioinformatics
#review #drug_discovery #repurposing #covid19
📘Journal: Bioorganic Chemistry (I.F.=5.307)
🗓Publish year: 2021
📎 Study the paper
📲Channel: @Bioinformatics
#review #drug_discovery #repurposing #covid19
👍4
📃 Mapping miRNA Research in Schizophrenia: A Scientometric Review
📘Journal: International Journal of Molecular Sciences (I.F.=6.208)
🗓Publish year: 2023
📎 Study the paper
📲Channel: @Bioinformatics
#review #miran #Schizophrenia
📘Journal: International Journal of Molecular Sciences (I.F.=6.208)
🗓Publish year: 2023
📎 Study the paper
📲Channel: @Bioinformatics
#review #miran #Schizophrenia
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📄Ten simple rules for defining a computational biology project
💥If you are working in the field of computational biology, then hopefully you are familiar with the excitement associated with coming up with a new idea and thinking about how to follow up on it. Maybe the idea came from a talk you heard at a conference, a paper you read, or a conversation with a colleague. Regardless, your brain is now abuzz with how this idea will be implemented and what data you’ll need to validate it. Ultimately, if your idea pans out, perhaps it will lead to profound scientific insights, a high-impact paper, and a widely used software tool. But for now, it’s just an idea in your head. How do you begin to bring your new idea to fruition? This is, of course, the core of the scientific method–transforming an idea (or hypothesis) into discoveries. Hence, your success as a scientist depends strongly on your ability to efficiently and effectively carry out such transformations.
Here, I focus on the very first few steps of that transformation, providing some general rules that can help start your new project in the right direction. Some of these rules may be considered variations on the questions asked in the Heilmeier catechism (https://www.darpa.mil/work-with-us/heilmeier-catechism), which is a set of questions that the US Defense Advanced Projects Agency uses to evaluate potential research projects.
📘Journal: PLOS Computational Biology (I.F.=4.779)
🗓Publish year: 2023
📎 Study the paper
📲Channel: @Bioinformatics
💥If you are working in the field of computational biology, then hopefully you are familiar with the excitement associated with coming up with a new idea and thinking about how to follow up on it. Maybe the idea came from a talk you heard at a conference, a paper you read, or a conversation with a colleague. Regardless, your brain is now abuzz with how this idea will be implemented and what data you’ll need to validate it. Ultimately, if your idea pans out, perhaps it will lead to profound scientific insights, a high-impact paper, and a widely used software tool. But for now, it’s just an idea in your head. How do you begin to bring your new idea to fruition? This is, of course, the core of the scientific method–transforming an idea (or hypothesis) into discoveries. Hence, your success as a scientist depends strongly on your ability to efficiently and effectively carry out such transformations.
Here, I focus on the very first few steps of that transformation, providing some general rules that can help start your new project in the right direction. Some of these rules may be considered variations on the questions asked in the Heilmeier catechism (https://www.darpa.mil/work-with-us/heilmeier-catechism), which is a set of questions that the US Defense Advanced Projects Agency uses to evaluate potential research projects.
📘Journal: PLOS Computational Biology (I.F.=4.779)
🗓Publish year: 2023
📎 Study the paper
📲Channel: @Bioinformatics
👍5
🎓 A review of data mining in bioinformatics
📘BSc Thesis from Centria University of Applied Sciences, Finland
🗓Publish year: 2019
📎 Study thesis
📲Channel: @Bioinformatics
#thesis #data_mining #review
📘BSc Thesis from Centria University of Applied Sciences, Finland
🗓Publish year: 2019
📎 Study thesis
📲Channel: @Bioinformatics
#thesis #data_mining #review
👍9
📃 Machine-Learning-Based Disease Diagnosis: A Comprehensive Review
📘Journal: Healthcare (I.F.=3.160)
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
#review #machine_learning #disease
📘Journal: Healthcare (I.F.=3.160)
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
#review #machine_learning #disease
👍7
💥Introduction to NCBI Pathogen Detection and antimicrobial resistance data in Google BigQuery💥
🧑💻Free webinar from NCBI
🗓 Date: Mar 29, 2023
🕖 Time: 12:00 PM in Eastern Time (US and Canada)
📍 Location: Online, Zoom
✍🏻 Details and Registration
📲Channel: @Bioinformatics
#webinar #pathogen #google
🧑💻Free webinar from NCBI
🗓 Date: Mar 29, 2023
🕖 Time: 12:00 PM in Eastern Time (US and Canada)
📍 Location: Online, Zoom
✍🏻 Details and Registration
📲Channel: @Bioinformatics
#webinar #pathogen #google
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📑Precision Medicine Informatics: Principles, Prospects, and Challenges
📘Journal: IEEE Access (I.F.=3.367)
🗓Publish year: 2019
📎 Study the paper
📲Channel: @Bioinformatics
#review #precision_medicine
📘Journal: IEEE Access (I.F.=3.367)
🗓Publish year: 2019
📎 Study the paper
📲Channel: @Bioinformatics
#review #precision_medicine
👍7🤔2
📃A survey of the most recent Python packages for use in biology
📘Journal: NeuroQuantology
🗓Publish year: 2023
📎 Study the paper
📲Channel: @Bioinformatics
#review #python
📘Journal: NeuroQuantology
🗓Publish year: 2023
📎 Study the paper
📲Channel: @Bioinformatics
#review #python
👍6❤4
📑Artificial intelligence in medical diagnostics: A review from a South African context
📘Journal: Scientific African
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
#review #ai #medical #african
📘Journal: Scientific African
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
#review #ai #medical #african
👍5
👨🏫A machine learning workshop with R
💥TCGA Biomarkers Identification using Machine Learning💥
🎞 Watch
↙️ Slides
👨💻Code
📲Channel: @Bioinformatics
#video #machine_learning #biomarker #r
💥TCGA Biomarkers Identification using Machine Learning💥
🎞 Watch
↙️ Slides
👨💻Code
📲Channel: @Bioinformatics
#video #machine_learning #biomarker #r
YouTube
TCGA Biomarkers Identification using Machine Learning | Complete Walkthrough
Well, mostly doing this since people have been asking to connect the database with some basic machine learning noscript , so I might as well capitalized on this. Anyhow, I mostly wrote this with the mindset on education and not really on research so the code…
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📃Deep learning: new computational modelling techniques for genomics
📘Journal: Nature Reviews Genetics (I.F.=59.94)
🗓Publish year: 2019
📎 Study the paper
📲Channel: @Bioinformatics
#review #deep_learning #genomics
📘Journal: Nature Reviews Genetics (I.F.=59.94)
🗓Publish year: 2019
📎 Study the paper
📲Channel: @Bioinformatics
#review #deep_learning #genomics
👍6❤1
🎥 Network Biology: Introduction to STRING and Cytoscape
👨🏫 Part of the "Statistical Methods in Bioinformatics" Ph.D. course offered by University of Copenhagen
🎞 Watch
👨💻Associated hands-on exercises
📲Channel: @Bioinformatics
#video #network_biology #STRING #Cytoscape
👨🏫 Part of the "Statistical Methods in Bioinformatics" Ph.D. course offered by University of Copenhagen
🎞 Watch
👨💻Associated hands-on exercises
📲Channel: @Bioinformatics
#video #network_biology #STRING #Cytoscape
YouTube
Network Biology: Introduction to STRING and Cytoscape
This lecture and software demo will cover the STRING database of protein interactions, related online database resources, the Cytoscape network analysis framework, and how the Cytoscape stringApp allows these to all be used together for omics data visualization.…
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Forwarded from Network Analysis Resources & Updates
📑 Protein interaction networks: centrality, modularity, dynamics, and applications
📘Journal: Frontiers of Computer Science (I.F.=2.669)
🗓Publish year: 2021
📎 Study the paper
📲Channel: @ComplexNetworkAnalysis
#review #ppi
📘Journal: Frontiers of Computer Science (I.F.=2.669)
🗓Publish year: 2021
📎 Study the paper
📲Channel: @ComplexNetworkAnalysis
#review #ppi
👍10
🎬 Using Python for cancer prediction by machine learning
🎞 Watch
📲Channel: @Bioinformatics
#video #cancer #python #machine_learning
🎞 Watch
📲Channel: @Bioinformatics
#video #cancer #python #machine_learning
YouTube
Machine learning for Cancer Prediction with Gene Expression Data | Random Forests | Python Tutorial
Cancer Prediction with Machine Learning
Consultation(Video Conferencing): https://calendly.com/bioinformaticscoach
Teaching(Video Conferencing): https://calendly.com/bioinformaticscoach
Consultation(Audio Call): https://clarity.fm/vincentappiah
Support…
Consultation(Video Conferencing): https://calendly.com/bioinformaticscoach
Teaching(Video Conferencing): https://calendly.com/bioinformaticscoach
Consultation(Audio Call): https://clarity.fm/vincentappiah
Support…
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📃 Machine learning for epigenetics and future medical applications
📘Journal: Epigenetics (I.F.=4.861)
📎 Study the paper
📲Channel: @Bioinformatics
#review #epigenetics
📘Journal: Epigenetics (I.F.=4.861)
📎 Study the paper
📲Channel: @Bioinformatics
#review #epigenetics
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📹Find differentially expressed genes in your research
💥A practical step-by-step tutorial
🎞 Watch
📲Channel: @Bioinformatics
#video #rna_seq
💥A practical step-by-step tutorial
🎞 Watch
📲Channel: @Bioinformatics
#video #rna_seq
YouTube
How to analyze RNA-Seq data? Find differentially expressed genes in your research.
If you benefit from my tutorial and use the same strategy for data analysis, please CITE my RNA-Seq paper published in "Scientific Reports - Nature": https://www.nature.com/articles/s41598-017-16603-y
And "PLOS ONE": https://journals.plos.org/plosone/art…
And "PLOS ONE": https://journals.plos.org/plosone/art…
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💥International Virtual Workshop ennoscriptd Basic Principles to Advanced techniques: Cheminformatics and MachineLearning in drugdiscovery💥
➡️ Jointly organised by
- NyBerMan Bioinformatics Europe, Orleans, France
- Vellore Institute of Technology, India
- Dr.M.G.R Educational & Research Institute University, India
- Quanta Calculus Pvt Ltd, India
🗓 Scheduled on 22-29th April 2023
Workshop Benefits:
- Provided with participation certificate
- Recorded video provided
- Live chat support during off and live sessions
- Tutors who deliver all the sessions have 10+ years of experience in the field.
👨💻Register now at our website
https://bit.ly/3Za1WYc
📚Check for more details in the flyer
https://bit.ly/3Za9KJx
**** First come First served ****
📲Channel: @Bioinformatics
#internationalworkshop #cheminfo #ml #drugdiscovery
➡️ Jointly organised by
- NyBerMan Bioinformatics Europe, Orleans, France
- Vellore Institute of Technology, India
- Dr.M.G.R Educational & Research Institute University, India
- Quanta Calculus Pvt Ltd, India
🗓 Scheduled on 22-29th April 2023
Workshop Benefits:
- Provided with participation certificate
- Recorded video provided
- Live chat support during off and live sessions
- Tutors who deliver all the sessions have 10+ years of experience in the field.
👨💻Register now at our website
https://bit.ly/3Za1WYc
📚Check for more details in the flyer
https://bit.ly/3Za9KJx
**** First come First served ****
📲Channel: @Bioinformatics
#internationalworkshop #cheminfo #ml #drugdiscovery
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📃 Comprehensive bioinformatics analysis of functional molecules in colorectal cancer
💥A paper with a good roadmap for a typical bioinformatics analysis research
📘Journal: Journal of Gastrointestinal Oncology (I.F.=2.587)
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
💥A paper with a good roadmap for a typical bioinformatics analysis research
📘Journal: Journal of Gastrointestinal Oncology (I.F.=2.587)
🗓Publish year: 2022
📎 Study the paper
📲Channel: @Bioinformatics
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