📄Machine learning applications for therapeutic tasks with genomics data
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📲Channel: @Bioinformatics
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🏢 1st International Conference and 10th National Conference of Iranian Bioinformatics
💥"The most important international bioinformatics event in Iran"
🗓 Date: 22-24 February 2022
💣 Abstract submission deadline: February 8, 2022
🖇Website: icb10.ut.ac.ir
📲Channel: @Bioinformatics
💥"The most important international bioinformatics event in Iran"
🗓 Date: 22-24 February 2022
💣 Abstract submission deadline: February 8, 2022
🖇Website: icb10.ut.ac.ir
📲Channel: @Bioinformatics
👥 Discussion: The Impact of Computational Methods in Drug Discovery and Biology
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📲Channel: @Bioinformatics
🎬 Watch
📲Channel: @Bioinformatics
YouTube
Panel: The Impact of Computational Methods in Drug Discovery and Biology
Tomás Sabat, Nik Sharma, Konrad Myśliwiec, Anthony Finbow, Zisis Kozlakidis
The ability to leverage computational methods holds incredible promise in the biomedical industry. How could we reverse the slowing trend of new approvals for therapeutic drugs by…
The ability to leverage computational methods holds incredible promise in the biomedical industry. How could we reverse the slowing trend of new approvals for therapeutic drugs by…
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📑A Review of 2020’s Top Translational Bioinformatics Publications
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📲Channel: @Bioinformatics
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📲Channel: @Bioinformatics
🇹🇿 A Baseline Evaluation of Bioinformatics Capacity in Tanzania Reveals Areas for Training
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🧑🏫Biological Modeling
💥A free online course in modeling biological systems at multiple scales
🌐 Course page
📲Channel: @Bioinformatics
💥A free online course in modeling biological systems at multiple scales
🌐 Course page
📲Channel: @Bioinformatics
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🎞Recorded webinars from HEE GEP in partnership with NHS England, summer 2021
▫️What is genomics?
▫️How is genomics changing healthcare?
▫️Genomics: It’s my time to learn!
📲Channel: @Bioinformatics
▫️What is genomics?
▫️How is genomics changing healthcare?
▫️Genomics: It’s my time to learn!
📲Channel: @Bioinformatics
📘Free online 2021 Bioinformatics book from NCBI Bookshelf
💥This book brings together an international team of experts to discuss the state-of-the-art from several fields of bioinformatics, from the automatic identification and classification of viruses to the analysis of the trannoscriptome of single cells and plants, including artificial intelligence algorithms to discover biomarkers and text mining approaches to help in the interpretation of the findings. Machine learning, pattern discovery and analysis, error correction, Bayesian inference and novel computational techniques to discover chromosomal rearrangements continue to play crucial roles in biological discovery, and all of them are explored in chapters of this book. In sum, this book contains high-quality chapters that provide excellent views into key topics of current bioinformatics research, topics that should remain important for the next several years.
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📲Channel: @Bioinformatics
💥This book brings together an international team of experts to discuss the state-of-the-art from several fields of bioinformatics, from the automatic identification and classification of viruses to the analysis of the trannoscriptome of single cells and plants, including artificial intelligence algorithms to discover biomarkers and text mining approaches to help in the interpretation of the findings. Machine learning, pattern discovery and analysis, error correction, Bayesian inference and novel computational techniques to discover chromosomal rearrangements continue to play crucial roles in biological discovery, and all of them are explored in chapters of this book. In sum, this book contains high-quality chapters that provide excellent views into key topics of current bioinformatics research, topics that should remain important for the next several years.
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📲Channel: @Bioinformatics
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🇮🇳 🇵🇰🇧🇩🇷🇸🇦🇫🇳🇵
Status of Bioinformatics Education in South Asia: Past and Present
💥From paper abstract: Bioinformatics education has been a hot topic in South Asia, and the interest in this education peaks with the start of the 21st century. This article renders bioinformatics, measures, and its importance of implementation in South Asia with proper ways of improving bioinformatics education flaws. It also addresses the problems faced in South Asia and proposes some recommendations regarding bioinformatics education. The information regarding bioinformatics education and institutes was collected from different existing research papers, databases, and surveys. The information was then confirmed by visiting each institution’s website, while problems and solutions displayed in the article are mostly in line with South Asian bioinformatics conferences and institutions’ objectives.
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📲Channel: @Bioinformatics
Status of Bioinformatics Education in South Asia: Past and Present
💥From paper abstract: Bioinformatics education has been a hot topic in South Asia, and the interest in this education peaks with the start of the 21st century. This article renders bioinformatics, measures, and its importance of implementation in South Asia with proper ways of improving bioinformatics education flaws. It also addresses the problems faced in South Asia and proposes some recommendations regarding bioinformatics education. The information regarding bioinformatics education and institutes was collected from different existing research papers, databases, and surveys. The information was then confirmed by visiting each institution’s website, while problems and solutions displayed in the article are mostly in line with South Asian bioinformatics conferences and institutions’ objectives.
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📑 Comprehensive analyses of bioinformatics applications in the fight against COVID-19 pandemic
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📑 Machine learning approaches and databases for prediction of drug–target interaction: a survey paper
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📲Channel: @Bioinformatics
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📲Channel: @Bioinformatics
👨🏻💻Free online course for bioinformatics trainers
💥Would you like to become a bioinformatics trainer or a better one? If so, this online course is for you!
🗓 Date: 1-4 February 2022
⏰ Time:13:30-17:00 CET
🌐 More information
✍🏻 Registrations
📲Channel: @Bioinformatics
💥Would you like to become a bioinformatics trainer or a better one? If so, this online course is for you!
🗓 Date: 1-4 February 2022
⏰ Time:13:30-17:00 CET
🌐 More information
✍🏻 Registrations
📲Channel: @Bioinformatics
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📃The bioinformatics toolbox for circRNA discovery and analysis
Abstract: Circular RNAs (circRNAs) are a unique class of RNA molecule identified more than 40 years ago. Recent advances in sequencing technologies and bioinformatics tools have led directly to an ever-expanding field of types and biological functions of circRNAs. In parallel with technological developments, practical applications of circRNAs have arisen including their utilization as biomarkers of human disease. Currently, circRNA-associated bioinformatics tools can support projects including circRNA annotation, circRNA identification and network analysis of competing endogenous RNA (ceRNA). In this review, we collected about 100 circRNA-associated bioinformatics tools and summarized their current attributes and capabilities. We also performed network analysis and text mining on circRNA tool publications in order to reveal trends in their ongoing development.
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📲Channel: @Bioinformatics
Abstract: Circular RNAs (circRNAs) are a unique class of RNA molecule identified more than 40 years ago. Recent advances in sequencing technologies and bioinformatics tools have led directly to an ever-expanding field of types and biological functions of circRNAs. In parallel with technological developments, practical applications of circRNAs have arisen including their utilization as biomarkers of human disease. Currently, circRNA-associated bioinformatics tools can support projects including circRNA annotation, circRNA identification and network analysis of competing endogenous RNA (ceRNA). In this review, we collected about 100 circRNA-associated bioinformatics tools and summarized their current attributes and capabilities. We also performed network analysis and text mining on circRNA tool publications in order to reveal trends in their ongoing development.
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📲Channel: @Bioinformatics
👍1
📑Good review about Clinical metagenomics
💥Abstract: Clinical metagenomic next-generation sequencing (mNGS), the comprehensive analysis of microbial and host genetic material (DNA and RNA) in samples from patients, is rapidly moving from research to clinical laboratories. This emerging approach is changing how physicians diagnose and treat infectious disease, with applications spanning a wide range of areas, including antimicrobial resistance, the microbiome, human host gene expression (trannoscriptomics) and oncology. Here, we focus on the challenges of implementing mNGS in the clinical laboratory and address potential solutions for maximizing its impact on patient care and public health.
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📲Channel: @Bioinformatics
💥Abstract: Clinical metagenomic next-generation sequencing (mNGS), the comprehensive analysis of microbial and host genetic material (DNA and RNA) in samples from patients, is rapidly moving from research to clinical laboratories. This emerging approach is changing how physicians diagnose and treat infectious disease, with applications spanning a wide range of areas, including antimicrobial resistance, the microbiome, human host gene expression (trannoscriptomics) and oncology. Here, we focus on the challenges of implementing mNGS in the clinical laboratory and address potential solutions for maximizing its impact on patient care and public health.
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📲Channel: @Bioinformatics
📄Blockchain for genomics and healthcare: a literature review, current status, classification and open issues
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👨🏻💻Free NCBI Virtual Workshop
💥An Update on NCBI BLAST and Other Sequence Analysis Tools
🔷In this workshop, you will learn to:
▫️Select the correct NCBI alignment tool for your task
▫️Choose the best BLAST database for your search goal
▫️Understand and use the new BLAST results page, output formats and statistics
▫️Display BLAST results in genomic context using graphical displays
▫️Analyze nucleotide primers: design, check the specificity, and display primer alignments
▫️Assess the taxonomic distribution of your BLAST matches and use the TreeViewer display to visualize relationships
▫️Use standalone BLAST, Magic-BLAST and SRA-BLAST to search remote databases at the NCBI or on the cloud
🗓 Date: 2022-01-25
🕐 Time: 01:00 PM to 04:00 PM
✍🏻 Registration link (Deadline: 2022-01-11)
🌐 More information
📲Channel: @Bioinformatics
💥An Update on NCBI BLAST and Other Sequence Analysis Tools
🔷In this workshop, you will learn to:
▫️Select the correct NCBI alignment tool for your task
▫️Choose the best BLAST database for your search goal
▫️Understand and use the new BLAST results page, output formats and statistics
▫️Display BLAST results in genomic context using graphical displays
▫️Analyze nucleotide primers: design, check the specificity, and display primer alignments
▫️Assess the taxonomic distribution of your BLAST matches and use the TreeViewer display to visualize relationships
▫️Use standalone BLAST, Magic-BLAST and SRA-BLAST to search remote databases at the NCBI or on the cloud
🗓 Date: 2022-01-25
🕐 Time: 01:00 PM to 04:00 PM
✍🏻 Registration link (Deadline: 2022-01-11)
🌐 More information
📲Channel: @Bioinformatics
👨💻 Postdoc positions at the lab of Professor Albert-László Barabási
💥Position Summary: The lab of Professor Albert-László Barabási, together with the Network Science Institute at Northeastern University and the Division of Network Medicine at Harvard University, is looking for postdoctoral research associates in the area of biological networks, bioinformatics and machine learning/AI.
Our current work spans the applications of networks toward understanding human diseases, disease progression, biomarker discovery and drug repurposing.
✅Basic Qualifications: We are seeking motivated individuals with an interest in exploring the complexity of biological systems from a network perspective. The ideal candidate has a bioinformatics, physics, computer science, mathematics, or statistics Ph.D., and working experience in network science/bioinformatics and ML/AI/DL. Experience and familiarity with biological systems is expected.
✍🏻Instructions: Interested candidates should submit an application consisting of (i) a current CV with publication lists, (ii) a brief statement of research experience and interests, and (iii) two letters of recommendation sent separately by the writers to: Rachael Leary at ccnrpostdoc@gmail.com or at Northeastern University, Center for Complex Network Research, 1100-177 Huntington Avenue, Boston, MA 02115.
ℹ️ More information
📲Channel: @Bioinformatics
💥Position Summary: The lab of Professor Albert-László Barabási, together with the Network Science Institute at Northeastern University and the Division of Network Medicine at Harvard University, is looking for postdoctoral research associates in the area of biological networks, bioinformatics and machine learning/AI.
Our current work spans the applications of networks toward understanding human diseases, disease progression, biomarker discovery and drug repurposing.
✅Basic Qualifications: We are seeking motivated individuals with an interest in exploring the complexity of biological systems from a network perspective. The ideal candidate has a bioinformatics, physics, computer science, mathematics, or statistics Ph.D., and working experience in network science/bioinformatics and ML/AI/DL. Experience and familiarity with biological systems is expected.
✍🏻Instructions: Interested candidates should submit an application consisting of (i) a current CV with publication lists, (ii) a brief statement of research experience and interests, and (iii) two letters of recommendation sent separately by the writers to: Rachael Leary at ccnrpostdoc@gmail.com or at Northeastern University, Center for Complex Network Research, 1100-177 Huntington Avenue, Boston, MA 02115.
ℹ️ More information
📲Channel: @Bioinformatics